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Form 990: AICPA's Answer to Unlocking the Tax Complexities

Author/Moderator: Robert R. Lyons, CPA / Julie L. Floch, CPA
Publisher: AICPA
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Description

Form 990, once a relatively simple form, has been completely rewritten and become more complex. Not only are CPAs required to perform numerical computations, but they must now answer probing IRS questions.

Objectives:

  • Become familiar with and understand the newly revised Form 990 with instructions.
  • Complete the 990 tax form
  • Solve unique filing problems
  • Handle extensive compensation reporting

Prerequisite: None

In this video, moderator Julie L. Floch, CPA, closely reviews Form 990 with Diane Cornwell, CPA, founder of Starfish Consulting Group in Crestwood, KY; and Robert R. Lyons, CPA, managing director of Tax Services, Nonprofit Group, of Marks Paneth & Shron LLP in New York, NY and author of this course.

(179-min. video) The DVD disk contains the video presentation and a viewable copy of the Manual.

The Additional Manual is for group study training only. Unlike other formats, it has no exam answer sheet and cannot be used to earn self-study credit.

Accepted for YB and EA credit.

Table of Contents

  • Chapter 1 - Form 990 – Basic Filing Requirements
    • Learning Objectives
    • Introduction
    • Who Must File
      • General Requirements
      • Sponsoring Organizations of Donor Advised Funds
      • Controlling Organizations Described in Code Section 512(b)(13)
      • Section 527 Political Organizations
      • Section 4947(a)(1) Non-Exempt Charitable Trust
    • Organizations Not Required to File Form 990
      • Affiliation
      • Alternative Treatment
    • Other Returns
      • Pending Application
    • Accounting Periods
    • When, Where, and How to File
      • Place and Time for Filing
      • Electronic Filing
      • Filing Extensions
      • Amended and Final Returns
      • Failure to File Penalties
      • Failure to Allow Inspection of Annual Returns and Exemption Application
    • Group Returns
      • Information Required to Be Filed Annually to Maintain Group Exemption
    • Public Inspection and Distribution of Annual Information Returns
      • Requirements
      • Time and Manner to Fulfill Written Request
    • Extensions of Form 990 (990-EZ)
    • Form 990-N
    • Accounting Changes
      • Accounting Year End
      • Group Changes in Accounting Periods
    • e-Filing
      • Form 990 e-File Requirements
      • Exceptions from e-Filing
      • Administrative Aspects to e-Filing
      • Conclusion
    • Practice Aid 1-1
    • Practice Aid 1-2
    • Practice Aid 1-3
    • Practice Aid 1-4 – Form 990 Checklist
  • Chapter 2 - Filing Form 990, Form 990-EZ, and Related Schedules
    • Learning Objectives
    • Introduction
    • Basic Outline of New Forms
    • Return Heading
    • Part I – Summary
      • Line 1: Mission or Significant Activity
      • Line 2: Discontinued Operations or Major Dispositions
      • Line 6: Number of Volunteers
      • Lines 7a and 7b: Unrelated Business Revenue and Taxable Income
      • Lines 8 through 19: Revenue/Expenses
    • Part II – Signature Block
      • Authorized Signature
      • Paid Preparer
    • Part III – Statement of Program Service Accomplishments
      • Expenses and Grants
      • Revenue
      • Donated Services
      • Program Services
    • Part IV – Checklist of Required Schedules
      • Line 1: Schedule A, Public Charity Status and Public Support
      • Line 2: Is the Organization Required to Complete Schedule B, Schedule of Contributors?
      • Lines 3 through 5
      • Lines 6 through 12
      • Line 13: Is the Organization Operating a School as Described in Section 170(b)(1)(A)(ii)?
      • Lines 14 through 16
      • Lines 17 through 19
      • Line 20: Did the Organization Operate One or More Hospitals?
      • Lines 21 and 22
      • Line 23: Did the Organization Answer “Yes” to Questions 3, 4, or 5 of Form 990, Part VII Section A?
      • Line 24a: Did the Organization Have a Tax-exempt Bond Issue with an Outstanding Principal Amount of More than $100,000 as of the Last Day of the Year, and That Was Issued after December 31, 2002?
      • Lines 25a through 28b
      • Lines 29 and 30
      • Lines 31 and 32
      • Lines 33 through 37
    • Part V – Statements Regarding Other IRS Filings and Tax Compliance
      • Line 1a: Number of Information Returns
      • Line 3b: Form 990-T
      • Line 6: Solicitations of Nondeductible Contributions
      • Line 7a and 7b: Quid pro quo Contributions
      • Line 7e and 7f: Personal Benefit Contract
      • Line 8: Disclosure of Excess Business Holdings
      • Donor-Advised Funds
      • Supporting Organizations
      • Line 9: 501(c)(3) and Other Sponsoring Organizations Maintaining Donor Advised Funds
      • Line 9a: Section 4966 Taxable Distributions
      • Line 9b: Distribution to Donor, Donor Advisor, or Related Person
    • Part VI – Governance, Management, and Disclosure
      • Section A: Governing Body and Management
      • Section C: Disclosure
    • Part VII – Compensation of Officers, Directors, Trustees, Key Employees, Highest Compensated Employees, and Independent Contractors
      • Overview
      • Section A: Officers, Directors, Trustees, Key Employees, and Highest Compensated Employees
      • Section B: Five Highest Compensated Independent Contractors
    • Part VIII – Statement of Revenues
      • Contributions in General
      • Solicitation of Non-Deductible Contributions
      • Non-Cash Contributions
      • Substantiation and Disclosure Requirements
      • Column (A): Total Revenue
      • Column (B): Related or exempt Function Revenue
      • Column (C): Unrelated Business Revenue
      • Column (D): Unrelated Business Revenue Excluded from Tax (under Sections 512, 513, or 514)
      • Line 1 in General
      • Line 1e: Grants versus Program Services
      • Line 2: Program Service Revenue
      • Lines 3, 4, and 5: Investment Income/Income from Investment of Tax-Exempt Bond Proceeds/Royalties
      • Line 6 Rents
      • Lines 7a through 7d: Gains (or Losses) from Sales of Assets Other Than Inventory
      • Line 8: Fundraising Events
      • Line 9a: Gross Income from Gaming Activities
      • Line 9b: Less Direct Expenses
      • Line 10a: Gross Sales of Inventory, Less Returns and Allowances
      • Line 12: Total Revenue
    • Part IX – Statement of Functional Expenses
      • General Analysis
      • Allocation of Indirect Expenses
      • Line 1: Grants to Governments and Organizations in the U.S.
      • Line 2: Grants and Other Assistance to Individuals in the U.S
      • Line 3: Grants and Other Assistance to Governments, Organizations, and Individuals outside the U.S.
      • Line 4: Benefits Paid To or For Members
      • Line 5: Compensation of Current Officers, Directors, and Key Employees
      • Compensation and Other Distributions to Disqualified Persons
      • Lines 7 through 24
      • Line 26: Joint Cost
      • Statement of Position (SOP) 98-2
      • Major Provisions
      • Purpose Criterion
      • Audience Criterion
      • Content Criterion
      • How to Allocate Joint Costs
    • Part X – Balance Sheet
      • General Analysis
      • Line 2: Savings and Temporary Cash Investments
      • Line 5: Receivables from Officers, Directors, Trustees, and Key Employees
      • Line 6: Receivables from Other Disqualified Persons
      • Line 7: Other Notes and Loans Receivable
      • Line 10: Land, Buildings, and Equipment
      • Line 11 through 13: Investments
      • Line 15: Other Assets
      • Line 19: Deferred Revenue
      • Line 20: Tax-Exempt Bonds
      • Lines 27 through 29: Organizations That Follow SFAS 117
      • Line 28: Temporarily Restricted
      • Line 29: Permanently Restricted
      • Lines 30 through 34
    • Part XI – Financial Statements and Reporting
      • Line 1: Accounting methods
      • Line 2: Financial Statements and Independent Accountants
      • Line 3a: Single Audit Act and OMB Circular A-133
      • Line 3b: Required Audits
  • Chapter 3 - Form 990-T, Exempt Organization Business Income Tax Return, and Related Issues
    • Learning Objectives
    • Introduction
    • General Filing Requirements – Form 990-T
      • Purpose of Form 990-T
      • Who Must File
      • Filing Deadlines, Due Dates, and Payment of Tax
      • Public Inspection
    • Rationale for Tax on Unrelated Business Income
      • Concept of Trade or Business as it Relates to Tax Exemption
    • Definition of Trade or Business
      • Exclusion
      • Criteria
      • Allowable Expenses in Computing Unrelated Business Income
      • Concept of “Directly Connected” Expenses
    • Critique of Form 990-T, Exempt Organization Business Income Tax Return [and Proxy Tax under Section 6033(e)]
      • Completing the Return
      • Consolidated Returns
      • Accounting Methods
    • Part I – Unrelated Trade or Business Income
    • Part II – Deductions Not Taken Elsewhere
    • Limitations
      • Social Clubs
      • Other Limitations
      • Net Operating Losses
      • Specific Deduction
    • Part III – Tax Computation
    • Part IV – Tax and Payments
    • Part V – Statements Regarding Certain Activities and Other Information
    • Schedules and Other Related Information
      • Schedule C – Rent Income (from Real Property and Personal Property Leased With Real Property)
      • Line Item Descriptions
    • Schedule E – Unrelated Debt-Financed Income
      • General Analysis
    • Schedule F – Interest, Annuities, Royalties, and Rents from Controlled Organizations
      • General Analysis
      • Line Item Descriptions
    • Schedule G – Investment Income of a §501(c)(7), (9), or (17) Organization
    • Schedule I – Exploited Exempt Activity Income, Other Than Advertising Income
    • Schedule J – Advertising Income
      • General Analysis
      • Line Item Descriptions
    • Schedule K – Compensation of Officers, Directors, and Trustees
  • Chapter 4 - Private Foundations
    • Learning Objectives
    • Introduction
    • Pension Protection Act of 2006 Changes
    • Excise Taxes and Other Restrictions on Private Foundations
      • Section 4940 Excise Tax on Net Investment Income
      • Section 4941 Excise Tax imposed on Self-Dealing by Private Foundation Insiders
      • Section 4942 Mandatory Distributions
      • Section 4943 Excess Business Holdings
      • Section 4944 Jeopardizing Investments
      • Section 4945 Taxable Expenditures
    • Conclusion
  • Chapter 5 - Latest Developments
  • Appendix A - Options to Improve Tax Compliance and Reform Tax Expenditures

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Excerpts

Organizations Not Required to File Form 990

The entire issue of who has to file becomes particularly confusing when combined with a narrow set of rules on who does not have to file. The exception to the exception is a supporting organization described in Code section 509(a)(3). These organizations are required to file under any and all circumstances, without regard to a minimum. The filing requirements become more complicated due to a group of exempt organizations that have to file a Form 990-N unless they voluntarily file another form. These organizations include

• A church-affiliated organization that is exclusively engaged in managing funds or maintaining retirement programs and is described in Rev. Proc. 96-10, 1996-1 C.B. 577.
• A foreign organization, including organizations located in U.S. Possessions, whose gross receipts from sources within the U.S. are normally $25,000 or less.
• A black lung benefit trust described in Code section 501(c)(21). Instead, this type of organization is required to file Form 990-BL, Information and Initial Excise Tax Return for Black Lung Benefit Trusts and Certain Related Persons.

In addition to the types discussed above, there is a broad range of other organizations not required to file Form 990, Form 990-EZ, or Form 990-N. These include

• A church, an interchurch organization of local units of a church, a convention or association of churches, or an integrated auxiliary of a church. (Example. Women's or men's organizations, religious schools, mission societies, or youth groups.)
• A church-affiliated organization that is exclusively engaged in managing funds or maintaining retirement programs and is described in Rev. Proc. 96-10, 1996-1 C.B. 577.
• A school below college level affiliated with a church or operated by a religious order.
• A mission society sponsored by, or affiliated with, one or more churches or church denominations, if more than half of the society's activities are conducted in, or directed at, persons in foreign countries.
• An exclusively religious activity of any religious order.

Note. If you are working with or plan to work with religious organizations, the AICPA offers an excellent course on working with faith-based organizations. While the course is designed as an accounting course rather than a tax course, it offers excellent insight and provides information relating to the tax aspects of religious organizations.

The entire issue of "church" and "church-related" can be quite perplexing. In the section Glossary of Terms, a rather basic definition of "church" is given. However, determination is not that simple. There is a significant difference between religious and faith-based organizations. While all religious organizations are faith based, not all faith-based organizations are religious.

This can make the difference between having to file a Form 990 and not having to file a Form 990. Faith-based organizations are required to file if they otherwise meet the requirements, and religious organizations are not required to file unless they choose to do so voluntarily. For example, Catholic Social Services or Lutheran Social Services, upon examination, appear clearly to be faith-based organizations. However, first and foremost they are part of either the Catholic Church or the Lutheran Church, respectively.

One of the most significant cases in this area is Lutheran Social Services of Minn. v. U.S., 54 AFTR 2d 84-5199. LSSM provided services including child care, adoption services, family and individual counseling services, residential treatment services for the emotionally disturbed, residential treatment services for mentally challenged adolescents and mentally challenged adults, residential treatment services involving a community-based correctional program for young male felons, a nutrition program for the aging, a camp for mentally and physically impaired individuals, community counseling programs, resettlement programs, and a chaplaincy program. The case provides excellent insight as to what constitutes church, church-related, and church auxiliary. The IRS initially contended that these programs were, for the most part, secular, while LSSM insisted the services were not religious but were "religiously motivated, manifestations of religious beliefs, forms of worship, and means of propagation of the Christian faith according to the tenets and practices of the Lutheran Churches by which the plaintiff is owned and controlled." LSSM fully agreed that many of the services they performed would be considered secular if performed by a non-religious organization. While the Court determined that LSSM was not part of the church in the sense of performing ecclesiastical duties, they decided in favor of Lutheran Social Services, on appeal, on the grounds that LSSM was a "church auxiliary" and, as such, they were not required to file a Form 990.

Once the issue was settled that LSSM was not a church, the second issue dealt with whether they were an "integrated auxiliary" of a church. Code section 6033(a)(3) also provides exemption from the filing requirements to "integrated auxiliaries" of a church. In the final Regulations implementing 6033, the Treasury Department defined "integrated auxiliary" as follows [Regulation 1.6033-2(g)(5)(i)]:

• An organization which is exempt from taxation as described in Code section 501(c)(3);
• Which is affiliated (within the meaning of paragraph (g)(5)(iii) of this section) with a church; and,
• Whose principal activity is exclusively religious.

In LSSM's case there was no question regarding qualification under the first two criteria. The problem was the meaning of the third criterion. The Regulations define "exclusively religious" from a negative point of view by outlining what it is not. According to Regulation 1.6033-2(g)(5)(ii), an organization's principal activity will not be considered exclusively religious if that activity is educational, literary, charitable, or an other nature (other than religious) that would serve as a basis for exemption under Code section 501(c)(3).

An issue often arises with church-related activities when there is no clear dividing line between church and secular activities, it being implied that churches are not required to file Form 990 and separate, unrelated activities are required to do so. The potential solution to the question of nexus is addressed in Regulation 1.6033-2, which discusses the various situations in which a return is not required. For the most part, the question of nexus rests on whether the affiliated organization is an integrated auxiliary of a church. The entire issue rests on a series of definitions.

For the purpose of determining nexus, the term "integrated auxiliary" of a church means an organization that is

• Described both in Code section 501(c)(3) and further defined in Code sections 509(a)(1), (2) or (3);
• Affiliated with a church, or a convention or association of churches; and
• Internally supported.

Affiliation

An organization is affiliated with a church, or a convention or association of churches, if the organization is either covered by a group exemption letter including both the church and the organization, or the organization is operated, supervised, or controlled by or in connection with a church or a convention of churches. This is primarily a facts and circumstances test. Under "normal" circumstances, relevant facts and circumstances that indicate an organization is affiliated with a church, or a convention or association of churches, include the following factors:

• The organization's corporate charter, trust documents, articles of association, etc., affirm that the organization shares common religious doctrines, principles, disciplines, or practices with a church or a convention of churches;
• A church, or a convention or association of churches has the authority to appoint or remove, or to control the appointment of, at least one of the organization's officers or directors;
• The corporate name of the organization indicates an institutional relationship with the church or convention of churches (i.e., Lutheran Social Services, Catholic Social Services, St. Agnes School, etc.);
• The organization reports at least annually on its financial and general operations to a church or a convention or association of churches;

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Videocourse Details

NASBA Field of Study: Taxes
Level: Basic
Recommended CPE Credit: Text-15; DVD/Manual-18
Yellow Book Hours: Text-15; DVD/Manual-18
Form 990: AICPA's Answer to Unlocking the Tax Complexities
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